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1

The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?

Gribaldo, Simonetta, Poole, Anthony M., Daubin, Vincent, Forterre, Patrick, Brochier-Armanet, Céline

Journal:

Nature Reviews Microbiology

Year:

2010

Language:

english

File:

PDF, 380 KB

english, 2010

2

Phylogeny and evolution of the Archaea: one hundred genomes later

Celine Brochier-Armanet, Patrick Forterre, Simonetta Gribaldo

Journal:

Current Opinion in Microbiology

Year:

2011

Language:

english

File:

PDF, 298 KB

english, 2011

3

Characterization of heterotrophic prokaryote subgroups in the Sfax coastal solar salterns by combining flow cytometry cell sorting and phylogenetic analysis

Hana Trigui, Salma Masmoudi, Céline Brochier-Armanet, Aude Barani, Gérald Grégori, Michel Denis, Sam Dukan, Sami Maalej

Journal:

Year:

2011

Language:

english

File:

PDF, 513 KB

english, 2011

4

Eubacterial phylogeny based on translational apparatus proteins

Céline Brochier, Eric Bapteste, David Moreira, Hervé Philippe

Journal:

Trends in Genetics

Year:

2002

Language:

english

File:

PDF, 87 KB

english, 2002

5

Giant viruses, giant chimeras: The multiple evolutionary histories of Mimivirus genes

David Moreira, Céline Brochier-Armanet

Journal:

BMC Evolutionary Biology

Year:

2008

Language:

english

File:

PDF, 387 KB

english, 2008

6

Phylogeny of prokaryotes: does it exist and why should we care?

Simonetta Gribaldo, Celine Brochier

Journal:

Research in Microbiology

Year:

2009

Language:

english

File:

PDF, 320 KB

english, 2009

7

Ribosomal proteins: Toward a next generation standard for prokaryotic systematics?

Ramulu, Hemalatha Golaconda, Groussin, Mathieu, Talla, Emmanuel, Planel, Remi, Daubin, Vincent, Brochier-Armanet, Céline

Journal:

Molecular Phylogenetics and Evolution

Year:

2014

Language:

english

File:

PDF, 6.18 MB

english, 2014

8

Phylogénies moléculaires et génomes

Brochier, Céline, Philippe, Hervé

Journal:

Year:

2000

File:

PDF, 1.83 MB

2000

9

Promiscuous Nickel Import in Human Pathogens: Structure, Thermodynamics, and Evolution of Extracytoplasmic Nickel-Binding Proteins

Lebrette, Hugo, Brochier-armanet, Céline, Zambelli, Barbara, de Reuse, Hilde, Borezée-Durant, Elise, Ciurli, Stefano, Cavazza, Christine

Journal:

Year:

2014

Language:

english

File:

PDF, 3.65 MB

english, 2014

10

The growing tree of Archaea: new perspectives on their diversity, evolution and ecology

Adam, Panagiotis S, Borrel, Guillaume, Brochier-Armanet, Céline, Gribaldo, Simonetta

Journal:

The ISME Journal

Year:

2017

Language:

english

File:

PDF, 2.59 MB

english, 2017

11

Comparative analysis of a genome fragment of an uncultivated mesopelagic crenarchaeote reveals multiple horizontal gene transfers

Purificación López-García, Céline Brochier, David Moreira, Francisco Rodríguez-Valera

Journal:

Environmental Microbiology

Year:

2004

Language:

english

File:

PDF, 528 KB

english, 2004

12

Happy together: genomic insights into the uniqueNanoarchaeum/Ignicoccusassociation

Patrick Forterre, Simonetta Gribaldo, Céline Brochier-Armanet

Journal:

Journal of Biology

Year:

2009

Language:

english

File:

PDF, 572 KB

english, 2009

13

Characteristics of a phylogenetically ambiguous, arsenic-oxidizingThiomonassp.,Thiomonas arsenitoxydansstrain 3AsTsp. nov

Djamila Slyemi, Danielle Moinier, Céline Brochier-Armanet, Violaine Bonnefoy, D. Barrie Johnson

Journal:

Archives of Microbiology

Year:

2011

Language:

english

File:

PDF, 326 KB

english, 2011

14

Comparison of alignment free string distances for complete genome phylogeny

Frédéric Guyon, Céline Brochier-Armanet, Alain Guénoche

Journal:

Advances in Data Analysis and Classification

Year:

2009

Language:

english

File:

PDF, 369 KB

english, 2009

15

Acquisition of a bacterial RumA-type tRNA(uracil-54, C5)-methyltransferase by Archaea through an ancient horizontal gene transfer

Jaunius Urbonavičius, Sylvie Auxilien, Hélène Walbott, Kalliopi Trachana, Béatrice Golinelli-Pimpaneau, Céline Brochier-Armanet, Henri Grosjean

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 819 KB

english, 2008

16

The Pseudomonas aeruginosa patatin-like protein PlpD is the archetype of a novel Type V secretion system

Richard Salacha, Filip Kovačić, Céline Brochier-Armanet, Susanne Wilhelm, Jan Tommassen, Alain Filloux, Romé Voulhoux, Sophie Bleves

Journal:

Environmental Microbiology

Year:

2010

Language:

english

File:

PDF, 1.18 MB

english, 2010

17

An oxygen reduction chain in the hyperthermophilic anaerobe Thermotoga maritima highlights horizontal gene transfer between Thermococcales and Thermotogales

Céline Le Fourn, Gaël Brasseur, Céline Brochier-Armanet, Laetitia Pieulle, Andrei Brioukhanov, Bernard Ollivier, Alain Dolla

Journal:

Environmental Microbiology

Year:

2011

Language:

english

File:

PDF, 488 KB

english, 2011

18

A eukaryotic-like sulfiredoxin involved in oxidative stress responses and in the reduction of the sulfinic form of 2-Cys peroxiredoxin in the cyanobacterium Anabaena PCC 7120

Céline Boileau, Laura Eme, Céline Brochier-Armanet, Annick Janicki, Cheng-Cai Zhang, Amel Latifi

Journal:

New Phytologist

Year:

2011

Language:

english

File:

PDF, 1.80 MB

english, 2011

19

Phylogeny: A non-hyperthermophilic ancestor for Bacteria

Brochier, Céline, Philippe, Hervé

Journal:

Year:

2002

Language:

english

File:

PDF, 47 KB

english, 2002

20

Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea

Brochier-Armanet, Céline, Deschamps, Philippe, López-García, Purificación, Zivanovic, Yvan, Rodríguez-Valera, Francisco, Moreira, David

Journal:

The ISME Journal

Year:

2011

Language:

english

File:

PDF, 7.15 MB

english, 2011

21

Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

Brochier-Armanet, Céline, Boussau, Bastien, Gribaldo, Simonetta, Forterre, Patrick

Journal:

Nature Reviews Microbiology

Year:

2008

Language:

english

File:

PDF, 619 KB

english, 2008

22

Comparative RNomics and Modomics in Mollicutes: Prediction of Gene Function and Evolutionary Implications

Valérie de Crécy-Lagard, Christian Marck, Céline Brochier-Armanet, Henri Grosjean

Journal:

Year:

2007

Language:

english

File:

PDF, 2.44 MB

english, 2007

23

Survival of extremely and moderately halophilic isolates of Tunisian solar salterns after UV-B or oxidative stress

Trigui, Hana, Masmoudi, Salma, Brochier-Armanet, Céline, Maalej, Sami, Dukan, Sam

Journal:

Canadian Journal of Microbiology

Year:

2011

File:

PDF, 1.54 MB

2011

24

Cultivation of the first mesophilic representative (“mesotoga”) within the order Thermotogales

Wagdi Ben Hania, Ramzi Ghodbane, Anne Postec, Céline Brochier-Armanet, Moktar Hamdi, Marie-Laure Fardeau, Bernard Ollivier

Journal:

Systematic and Applied Microbiology

Year:

2011

Language:

english

File:

PDF, 381 KB

english, 2011

25

Evolution of the haem copper oxidases superfamily: a rooting tale

Simonetta Gribaldo, Emmanuel Talla, Celine Brochier-Armanet

Journal:

Trends in Biochemical Sciences

Year:

2009

Language:

english

File:

PDF, 623 KB

english, 2009

26

The evolutionary history of ribosomal protein RpS14:: horizontal gene transfer at the heart of the ribosome

Céline Brochier, Hervé Philippe, David Moreira

Journal:

Trends in Genetics

Year:

2000

Language:

english

File:

PDF, 185 KB

english, 2000

27

The phylogenomic analysis of the anaphase promoting complex and its targets points to complex and modern-like control of the cell cycle in the last common ancestor of eukaryotes

Laura Eme, Aurélie Trilles, David Moreira, Céline Brochier-Armanet

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 390 KB

english, 2011

28

An emerging phylogenetic core of Archaea: phylogenies of transcription and translation machineries converge following addition of new genome sequences

Céline Brochier, Patrick Forterre, Simonetta Gribaldo

Journal:

BMC Evolutionary Biology

Year:

2005

Language:

english

File:

PDF, 287 KB

english, 2005

29

Phylogenomics of the archaeal flagellum: rare horizontal gene transfer in a unique motility structure

Elie Desmond, Celine Brochier-Armanet, Simonetta Gribaldo

Journal:

BMC Evolutionary Biology

Year:

2007

Language:

english

File:

PDF, 897 KB

english, 2007

30

Evolution of the Archaea

Patrick Forterre, Celine Brochier, Hervé Philippe

Journal:

Theoretical Population Biology

Year:

2002

Language:

english

File:

PDF, 388 KB

english, 2002

31

Horizontal gene transfer and archaeal origin of deoxyhypusine synthase homologous genes in bacteria

Céline Brochier, Purificación López-Garcı&amp, #x0301, a, David Moreira

Journal:

Year:

2004

Language:

english

File:

PDF, 827 KB

english, 2004

32

On the last common ancestor and early evolution of eukaryotes: reconstructing the history of mitochondrial ribosomes

Elie Desmond, Celine Brochier-Armanet, Patrick Forterre, Simonetta Gribaldo

Journal:

Research in Microbiology

Year:

2011

Language:

english

File:

PDF, 2.18 MB

english, 2011

33

Editorial: Archaea and the Tree of Life

Simonetta Gribaldo, Patrick Forterre, Celine Brochier-Armanet

Journal:

Research in Microbiology

Year:

2011

Language:

english

File:

PDF, 103 KB

english, 2011

34

Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota

Anja Spang, Roland Hatzenpichler, Céline Brochier-Armanet, Thomas Rattei, Patrick Tischler, Eva Spieck, Wolfgang Streit, David A. Stahl, Michael Wagner, Christa Schleper

Journal:

Trends in Microbiology

Year:

2010

Language:

english

File:

PDF, 1.32 MB

english, 2010

35

Time for order in microbial systematics

Simonetta Gribaldo, Céline Brochier-Armanet

Journal:

Trends in Microbiology

Year:

2012

Language:

english

File:

PDF, 106 KB

english, 2012

36

Molecular organization, biochemical function, cellular role and evolution of NfuA, an atypical Fe-S carrier

Béatrice Py, Catherine Gerez, Sandra Angelini, Rémy Planel, Daniel Vinella, Laurent Loiseau, Emmanuel Talla, Céline Brochier-Armanet, Ricardo Garcia Serres, Jean-Marc Latour, Sandrine Ollagnier-de Cho

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 1.40 MB

english, 2012

37

Comparative genomic analysis of the DUF71/COG2102 family predicts roles in diphthamide biosynthesis and B12 salvage

Valérie de Crécy-Lagard, Farhad Forouhar, Céline Brochier-Armanet, Liang Tong, John F Hunt

Journal:

Year:

2012

Language:

english

File:

PDF, 826 KB

english, 2012

38

A DNA topoisomerase IB in Thaumarchaeota testifies for the presence of this enzyme in the last common ancestor of Archaea and Eucarya

Céline Brochier-Armanet, Simonetta Gribaldo, Patrick Forterre

Journal:

Year:

2008

Language:

english

File:

PDF, 231 KB

english, 2008

39

Iron-Sulfur (Fe/S) Protein Biogenesis: Phylogenomic and Genetic Studies of A-Type Carriers

Vinella, Daniel, Brochier-Armanet, Céline, Loiseau, Laurent, Talla, Emmanuel, Barras, Frédéric, Burkholder, William F.

Journal:

Year:

2009

Language:

english

File:

PDF, 969 KB

english, 2009

40

Emergence and Modular Evolution of a Novel Motility Machinery in Bacteria

Luciano, Jennifer, Agrebi, Rym, Le Gall, Anne Valérie, Wartel, Morgane, Fiegna, Francesca, Ducret, Adrien, Brochier-Armanet, Céline, Mignot, Tâm, Casadesús, Josep

Journal:

Year:

2011

Language:

english

File:

PDF, 2.83 MB

english, 2011

41

De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities

Narasingarao, Priya, Podell, Sheila, Ugalde, Juan A, Brochier-Armanet, Céline, Emerson, Joanne B, Brocks, Jochen J, Heidelberg, Karla B, Banfield, Jillian F, Allen, Eric E

Journal:

The ISME Journal

Year:

2012

Language:

english

File:

PDF, 1.28 MB

english, 2012

42

The two tempos of nuclear pore complex evolution: highly adapting proteins in an ancient frozen structure

Eric Bapteste, Robert L Charlebois, Dave MacLeod, Céline Brochier

Journal:

Year:

2005

Language:

english

File:

PDF, 511 KB

english, 2005

43

Nanoarchaea: representatives of a novel archaeal phylum or a fast-evolving euryarchaeal lineage related to Thermococcales?

Celine Brochier, Simonetta Gribaldo, Yvan Zivanovic, Fabrice Confalonieri…

Journal:

Year:

2005

Language:

english

File:

PDF, 262 KB

english, 2005

44

Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling theMethanopyrus kandleriparadox

Céline Brochier, Patrick Forterre, Simonetta Gribaldo

Journal:

Year:

2004

Language:

english

File:

PDF, 324 KB

english, 2004

45

Metagenomics of Kamchatkan hot spring filaments reveal two new major (hyper)thermophilic lineages related to Thaumarchaeota

Eme, Laura, Reigstad, Laila J., Spang, Anja, Lanzén, Anders, Weinmaier, Thomas, Rattei, Thomas, Schleper, Christa, Brochier-Armanet, Céline

Journal:

Research in Microbiology

Year:

2013

Language:

english

File:

PDF, 865 KB

english, 2013

46

Anaerobic oxidation of long-chain n-alkanes by the hyperthermophilic sulfate-reducing archaeon, Archaeoglobus fulgidus

Khelifi, Nadia, Amin Ali, Oulfat, Roche, Philippe, Grossi, Vincent, Brochier-Armanet, Céline, Valette, Odile, Ollivier, Bernard, Dolla, Alain, Hirschler-Réa, Agnès

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 7.03 MB

english, 2014

47

Plant, Animal, and Fungal Micronutrient Queuosine Is Salvaged by Members of the DUF2419 Protein Family

Zallot, Rémi, Brochier-Armanet, Céline, Gaston, Kirk W., Forouhar, Farhad, Limbach, Patrick A., Hunt, John F., de Crécy-Lagard, Valérie

Journal:

ACS Chemical Biology

Year:

2014

Language:

english

File:

PDF, 4.00 MB

english, 2014

48

The Assembly Mode of the Pseudopilus

Durand, Eric, Alphonse, Sébastien, Brochier-Armanet, Céline, Ball, Geneviève, Douzi, Badreddine, Filloux, Alain, Bernard, Cédric, Voulhoux, Romé

Journal:

Journal of Biological Chemistry

Year:

2011

Language:

english

File:

PDF, 3.94 MB

english, 2011

49

An evolutionary link between capsular biogenesis and surface motility in bacteria

Agrebi, Rym, Wartel, Morgane, Brochier-Armanet, Céline, Mignot, Tâm

Journal:

Nature Reviews Microbiology

Year:

2015

Language:

english

File:

PDF, 1.22 MB

english, 2015

50

Constitutive arsenite oxidase expression detected in arsenic-hypertolerant Pseudomonas xanthomarina S11

Koechler, Sandrine, Arsène-Ploetze, Florence, Brochier-Armanet, Céline, Goulhen-Chollet, Florence, Heinrich-Salmeron, Audrey, Jost, Bernard, Lièvremont, Didier, Philipps, Muriel, Plewniak, Frédéric, B

Journal:

Research in Microbiology

Year:

2015

Language:

english

File:

PDF, 1.43 MB

english, 2015

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